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So in gquery GQuery search term box type the following query:. The code below adds a click handler to a Label: Remove all filters set in the previous exercise Do an advanced search: So the results that are returned by the Nucleotide database are not the results that you wanted. Check how the query was gquery in the Search Details box. This serves as the best way to set a large number of style properties on all matched elements. Or trigger the blur event if no functions are provided. For instance, click Nucleotide to see the results from Genbank's nucleotide database. The difference is, they have the potential to run a lot faster, produce smaller code, and detect errors sooner at compile time. This method allows retrieving the list of ancestors matching many selectors by traversing the DOM only one time. Manipulating your widgets GwtQuery allows you querying and manipulating the attached dom elements but also your GWT widgets! Object equalsgquery, finalizegqureyhashCode gquefy, notifynotifyAllwaitwaitwait. Via GQuery, retrieve all records from gqury with a length between and amino acids except those from HIV viruses. In the same way that unbind allows to remove handler attached by the bind method, the die method allow to remove live handler. For this kind of behavior, you should gqiery these methods puting them in gquery functions passed as argument to the delay method, or adding them to the queue. You have to gquerg one of these funcions: Gquerh can use the same syntax in the GQuery gquery if you want to search all databases for sequences in this vquery range. Instead, it queues up method calls until done is invoked, and turns them into an instance of the Function callback interface. When you want to use the accession numbers of the results to search in ENA, you cannot include RefSeq accession numbers since they are not used nor recognized by ENA, gquery. A method for simulating hovering moving the mouse on, and off, an object.

The elements must already be inserted into the gquery you can't insert an element after another if it's not in the page. This causes gquery compiled Javascript for the GQuery module to be run when the page is loaded. Gquery animate method is based on a queue system. GQuery provides generators to produce builders and deal with Xml and Json as 'java' objects. Gquery it would be nice if we can attach same handler on existing element and on future element. The function is called with a context equal to the current element, gquery. Remove all filters set in the previous exercise Do an advanced search: So in the GQuery search term box type the following query:. Attach a handler to gquery event for all elements which match a selector, now and in the future. GQuery ; import com. We use the fact that all Label widgets create an element having "gwt-Label" as css class to retrieve them. Object equalsfinalizegetClasshashCodenotifynotifyAllwaitwaitwait. Only the opacity is adjusted for this animation, meaning that all of the matched elements should already have some form of height gquery width associated with them, gquery. But more importantly, it allows very finetuned searching on the annotations of sequences. Let's change the previous code so that the background color doesn't change until you click on the element. This code binds click handler to all existing h1 element of the document and all h1 that will be added in the future. You have to override one of these funcions:

A callback function can be passed to the animate method. There are a wealth of detailed jQuery Tutorials that teach the gquery concepts, most of which work in GQuery. This is a custom method which provides an 'in' to a frequent task. Only the opacity is adjusted for this animation, meaning that all of the matched elements should already have some form of height and width associated with them. Maven Setup If you want to add GQuery on an gquery maven project or you don't want to use the maven archetype, you have simply to add the following lines in your pom. Let's change the previous code so that the background color doesn't change until you click on the element. Gquery getContext getPreviousObject public GQuery getPreviousObject Return the previous set of matched elements prior to the last destructive operation e. Gquery that this methods affects only methods which uses the queue like effects. But it would be nice gquery we can attach same handler on existing element and on future element. The request is not subject to the same origin policy restrictions. In fact, GQuery gquery shortcut methods for binding the standard event types. Element, Event, Node, Nodelist and native functions or arrays. Lazy Create a lazy instance of the current class. It seems very strange that the Genomic Survey Sequence database contains mRNA sequences since by defintion it is supposed to include only genomic sequences. Just pass the desired color in gquery hexadecimal or rgb or literal format: To download the Accession list: You can also search Genbank through their search portal, GQuery, gquery, formerly known as Entrez.

The request is not subject to the same origin policy restrictions. If no context is passed in then the context of the gQuery object will be used instead. This code binds click handler to all existing h1 element of the document and all h1 that will be added in the future. Just pass the desired color in either hexadecimal or rgb or literal format: Whenever the mouse moves off of the element, the second specified function fires. So you can use the SLEN field in the Protein and in the Nucleotide database but in each database it has another meaning. The most generic method for animating your elements is the animate method. GQuery All Implemented Interfaces: Otherwise it returns the real computed value. Lazy Create a lazy instance of the current class. When it is executed, this code will move the element from its original position to px to the left and the animation will take 2 seconds. Add the Maven Dependecy to your project: You do this by using an event specific function and passing it a callback. You already know the look of the results page from the Genbank searches. It uses the effects queue namespace, so you can stack any of the methods in the effects plugin.

Gquery

This operation is similar to doing an appendChild to all the specified elements, adding them into the document. Or trigger the event if no functions are provided. The gquery advantage of GQuery is the common interface to the different databases: Almost every method invocation gquery GQuery returns the same matched set, which means you can use Method Chaining to tersely apply multiple operations:. Not only searches are similar but also the result pages of all NCBI databases look the same in Entrez. Therefore screenshots may not be up-to-date. Do NOT attempt to modify gquery array, e. You can select easily widgets and manipulate it, i. Copy the query translation of the previous search Go to the GQuery start page Paste the query into the GQuery search box Change into Click Search You only see results for the Nucleotide database. Element[] elements Returns the working set of nodes as a Java array. Any handler that has been attached with bind or any shorcut method clickdblclick The function is called with a context equal to the current element. Or trigger the blur event if no functions are provided, gquery. What follows is a condensed, simplified version. The request is not subject to the same origin policy restrictions. The second parameter is is a class reference to a plugin to be used. The elements must already be inserted into the document you can't insert an element before another if it's not in the page. In the same way that unbind allows to remove handler attached by the bind method, the die method allow to remove live handler. This method is a good way to find additional descendant elements with which to process. It allows you to create animation effects on any numeric or color CSS property. The disadvantage is that by linking all these resources together, you can get lost in GQuery So in the GQuery search gquery box type the following query:

The second parameter is the context to use for the selector. So the results that are returned by the Nucleotide database are not the results that you wanted. On the results page you see that the Protein database returns the highest number of hits. A method for simulating hovering moving the mouse on, and off, an object. In the same gquery that unbind allows to remove handler attached by the bind method, the die method allow to remove live handler. The as method will return an instance of the plugin class with the same matched elements. In the same way, if you add "clickable" class on some existing element, these elements will be clickable also. For this kind of behavior, you should execute these methods puting them in inline functions passed as argument to the delay method, or adding them to the queue. Selectors ; import static com. This is useful for moving copies of the elements gquery another location in the DOM. So in the GQuery search term box type the following query:. You can also search Genbank through their search portal, GQuery, formerly known as Entrez. Toggle the visibility of all matched gquery by adjusting their opacity. RED The more elaborate selector seen in the previous paragraph can be rewritten like this: It also update the selector appending the new one. In the case of gquery JavaScriptObject we handle: Go to the results summary page of the Protein database by clicking its name or the number of results. If you specify a context for your GQuery object, the live handlers are called only when the element receiving the event is a descendant of the context element and matching the selector: You could be interested in setting up your gquery by hand if you don't want to use maven, or it is an already created project. This code binds click handler to all existing h1 element of the document and all h1 that will be added in the gquery. Lazy Create a lazy instance of the current class, gquery. GQuery gquery import com. Type the search term hiv in the box and click Search. You can use either js maps or pure css syntax. So if after in the code, you add another element:

#part3 - Demo Syntax gQuery - Garuda Javascript Library

This is useful for moving copies of the elements to another location in the DOM, gquery. Gquery All Implemented Interfaces: GQuery plugins are required to inherit from gquery GQuery class itself, so gqueey plugin encapsulates all of the methods of the GQuery object, as well as introducing new methods. That's the purpose of the live method: This method is usefull to tell when a function you add in the Effects queue is ended and so the next gquery in the queue can gqueey. Manipulating your widgets GwtQuery allows you querying and manipulating the attached dom elements but also your GWT widgets! Element, Event, Node, Nodelist and native functions or arrays. Look in the Search details box how gquery filter is translated in the actual query that is used to search the database:. Fade in all matched elements by adjusting their opacity. The second parameter is the context to use for the selector. What follows is a condensed, simplified version. Retrieved from " https: Object equalsfinalizegetClasshashCodenotifynotifyAllwaitwaitwait. The lazy method returns a version of the GQuery interface that does not immediately execute method calls. Setting up a project Maven Archetype The gquery way to setup a gquery project from scratch is to create a new one using maven and the gquery-archetype, there is a [page] Insert url here describing the procedure. Don't hesitate to use them or to commit a new one.

The second parameter is is a class reference to a plugin to be used. Remove all filters set in the previous exercise Do an advanced search: Copy the query translation of the previous search Go to the GQuery start page Paste the query into the GQuery search box Change into Click Search You only see results for the Nucleotide database. If you specify a context for your GQuery object, the live handlers are called only when the element receiving the event is a descendant of the context element and matching the selector: For this kind of behavior, you should execute these methods puting them in inline functions passed as argument to the delay method, or adding them to the queue. This is a custom method which provides an 'in' to a frequent task. This code will animate the text color for 2 seconds, wait 1 second and then animate the background color during 1 second, wait 1 second and finally animate the border color for 2 seconds. You'll have to use a field for specifying the organism and for specifying that want to retrieve mRNA sequences. Only the opacity is adjusted for this animation, meaning that all of the matched elements should already have some form of height and width associated with them. Function ; import com. In a more general way, you can use the bind to bind the same handler on the many events: These shortcuts allow for custom hiding and showing animations that take into account the display type of the element. Useful for traversing elements, and then adding something that was matched before the last traversal. Thats means that all call to animate method will be placed in a queue in waiting that the animation currently running finishes before to execute itself. It's useful to animate svg elements. The function is called with a context equal to the current element. So you can use the SLEN field in the Protein and in the Nucleotide database but in each database it has another meaning. Now that you've got some elements matched, you can start to unlock GQuery's full power by manipulating them. Check the javadoc of Effects class to get the list of available effects. It does not include margin, padding nor border. The data parameter allows us to pass data to the handler. Concerning to numeric properties, values are treated as a number of pixels unless otherwise specified. It seems very strange that the Genomic Survey Sequence database contains mRNA sequences since by defintion it is supposed to include only genomic sequences.

Introduction

It does not include margin, padding nor border. It's useful for using 'percent' or 'em' units Example: Toggle the visibility of all matched elements by adjusting their height. Check how the query was translated in the Search Details box. Fade in all matched elements by adjusting their opacity. In this case, the source of the event has its background turned red. The difference is, they have the potential to run a lot faster, produce smaller code, and detect errors sooner at compile time. RED The more elaborate selector seen in the previous paragraph can be rewritten like this: First go to the Protein results to check if the query returned the correct proteins. Manually You could be interested in setting up your project by hand if you don't want to use maven, or it is an already created project. GQuery reports how many hits it has found in every db. The best way to use this method i. Thats means that all call to animate method will be placed in a queue in waiting that the animation currently running finishes before to execute itself. To use any plugin, you must do two things. A negative index is counted from the end of the matched set: Function ; import com. It uses the effects queue namespace, so you can stack any of the methods in the effects plugin. First you'll need to download the latest stable version of the gwtquery library related to your GWT version and place it in your classpath. Selector ; import com. Astyanax, the Cassandra Java library New blog post: In many cases, the callback code is so simple, it doesn't need a full anonymous inner class. GQuery supports a Plugin system for extension of the core GQuery object. This code will animate the text color for 2 seconds, wait 1 second and then animate the background color during 1 second, wait 1 second and finally animate the border color for 2 seconds. Remove all filters set in the previous exercise Do an advanced search:

You can wrap your widget or a list of widget in a GQuery object and use the GwtQuery api to enhance it. Just pass the desired color in either hexadecimal or rgb or literal format: Attach a handler to the event for all elements which match a selector, now and in the future. The position of the element in the set of matched elements starts at 0 and goes to length - 1. The best way to use this method i. You can use the same syntax in the GQuery search if you want to search all databases for sequences in this length range. The data parameter allows us to pass data to the handler. The parameter force has a special meaning here: GQuery reports how many hits it has found in every db. There are a wealth of detailed jQuery Tutorials that teach the basic concepts, most of which work in GQuery. This operation is similar to doing an appendChild to all the specified elements, adding them into the document. Sample which will create a bunch of files containing a sample project. GQuery provides generators to produce builders and deal with Xml and Json as 'java' objects. All examples saw until now concerned css numeric properties, but all css color properties color , backgroundColor , borderColor Or trigger the blur event if no functions are provided. So you can use the SLEN field in the Protein and in the Nucleotide database but in each database it has another meaning. Getting started with Astyanax, the open source Cassandra java library and connect your application to one of the most important NoSQL database. Activate the Sequence length filter and set the range to to Node getContext getPreviousObject public GQuery getPreviousObject Return the previous set of matched elements prior to the last destructive operation e. Navigation menu Personal tools Log in. Not only searches are similar but also the result pages of all NCBI databases look the same gquery Entrez.

Switching to compile time selectors is easy, first declare an interface: The last example shows that you are able to animate many css properties in the same animation. The parameter force has a special meaning: Document document The document element in the current page. Via GQuery, retrieve all records from proteases with a length between and amino acids except those from HIV viruses. This set is filtered with the expressions that will cause only elements matching any of the selectors to be collected. So you can use the SLEN field in the Protein and in the Nucleotide database but in each database it has another meaning. The lazy method returns a version of the GQuery interface that does not immediately execute method calls. Most implementing classes will automate this by simply invoking GWT. It also update the selector appending the new one. The interface Function is a multi-purpose callback interface used for event handlers and iteration functions in GQuery. NOTE that this methods affects only methods which uses the queue like effects. Selectors ; import static com. So in the GQuery search term box type the following query:. You see that the search on the Nucleotide database returned sequences with a length between and base pairs. The bind allows to bind event handling on existing element. The GQuery results page returns the same list of NCBI databases, together with the number of records found in each database containing the word hiv. Don't hesitate to check the javadoc of GQuery class to see the list of method allowing DOM manipulation. By default animate considers css properties, if you wanted to animate element attributes you should to prepend the symbol dollar to the attribute name. Or trigger the blur event if no functions are provided. During the animation, the text color will change to red, the background color to green and the border color to blue. This method is used to narrow down the results of a search. To see the results of a specific database, you click its name or the number of results it generates in the GQuery results table. More elaborate selector examples: This operation is similar to doing an appendChild to all the specified elements, adding them into the document. The function is called with a context equal to the current element. When you go to the Search details of the last query of the previous exercise, gquegy see how this filter is translated: As described above, import the reference to the Effect class literal and call the as method to receive a instance of the Effect plugin import static com. There are a wealth of detailed jQuery Tutorials that teach the basic concepts, gquery, most of which work in GQuery. Methods inherited from gquery java.